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Analyst QS / Bioanalyst File Structure and Computer System Maintenance Tutorial

This tutorial will cover Analyst QS / BioAnalyst file structure in the Windows NT environment as well as routine computer maintenance to help keep the computer system running optimally.

1.1 Analyst QS Program File Structure.

On the Dell NT systems supplied by Applied Biosystems/MDS Sciex, two hard drive partitions are present; C: and D: drives. The C drive is the smaller partition and contains the Windows NT system programs. Analyst QS should be installed on the D drive, which is the larger partition.

Within the folder Analyst (found under Program Files on the D drive), five sub-folders are present. The bin folder contains the Analyst QS program files. The oMALDI Server folder contains the software to control the new oMALDI source on the QStar Pulsar i. Contents of these two folders should not be altered, as this will affect the software’s functionality. The Firmware folder contains the instrument system controller software as well as the instrument firmware files. These files can be used to download new firmware to the instrument when required (this procedure is described in detail in the installation notes for the Analyst QS software). The Help folder contains the built-in help files, as accessed from the Help menu in the program and the Release Notes. The Simulation folder contains the instrument data files needed to run Analyst QS in simulation mode.

1.2 Analyst QS Project File Structure.

All data acquired by Analyst QS is stored in the folder on drive D called PE Sciex Data. Within this folder, all data is divided up into a number of Projects. The API Instrument project is a unique project, which should not be copied or used for general work. It contains all the general information required for the instrument and the software. The other user-defined

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