...We discard the supernatant and we again resuspend the pellet in ice cold buffer following another one centrifugation at 10.000 g. The pellet that we will collect after that will be resuspended in ice cold mitochondrial resuspension buffer (MRB) using a loose fitting glass/ Teflon Potter Elvehjem homogenizer. Then for the fractionation we add Percoll (a media for density gradient centrifugation cells) in a Polyallomer ultracentrifuge tubes. On top of the percoll we add the suspension of the mitochondria and on top of that MRB solution until we fill we reach about 5 mm below the top of the tube. We centrifuge at 95.000 g for 30 minutes using a Beckman Coultr Optima L-100 XP Ultracentrifuge (AW40 rotor, Beckman, Fullerto). In the end of the centrifugation we will get a dense layer at the bottom containing pure mitochondria, in addition another one layer will appear above the mitochondria containing mitochondrial associated membranes (MAM). We can collect the pure mitochondria layer using Pasteur pipette and resuspend it...
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...various structural components to allow it to maintain life which are known as organelles. All the organelles are suspended within a gelatinous matrix, the cytoplasm, which is contained within the cell membrane. One of the few cells in the human body that lacks almost all organelles are the red blood cells. The main organelles are as follows: * cell membrane * endoplasmic reticulum * Golgi apparatus * lysosomes * mitochondria * nucleus * perioxisomes * microfilaments and microtubules Cell Membrane The cell membrane is the outer coating of the cell and contains the cytoplasm, substances within it and the organelle. It is a double-layered membrane composed of proteins and lipids. The lipid molecules on the outer and inner part (lipid bilayer) allow it to selectively transport substances in and out of the cell. Endoplasmic Reticulum The endoplasmic reticulum (ER) is a membranous structure that contains a network of tubules and vesicles. Its structure is such that substances can move through it and be kept in isolation from the rest of the cell until the manufacturing processes conducted within are completed. There are two types of endoplasmic reticulum – rough (granular) and smooth (agranular). * The rough endoplasmic reticulum (RER / granular ER) contains a combination of proteins and enzymes. These parts of the endoplasmic reticulum contain a number of ribosomes giving it a rough appearance. Its function is to synthesize new proteins. ...
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...contains various structural components to allow it to maintain life which are known as organelles. All the organelles are suspended within a gelatinous matrix, the cytoplasm, which is contained within the cell membrane. One of the few cells in the human body that lacks almost all organelles are the red blood cells. The main components are: * cell membrane * endoplasmic reticulum * Golgi apparatus * lysosomes * mitochondria * nucleus * perioxisomes * microfilaments and microtubules Cell Membrane The cell membrane is the outer coating of the cell and contains the cytoplasm, substances within it and the organelle. It is a double-layered membrane composed of proteins and lipids. The lipid molecules on the outer and inner part (lipid bilayer) allow it to selectively transport substances in and out of the cell. Endoplasmic Reticulum The endoplasmic reticulum (ER) is a membranous structure that contains a network of tubules and vesicles. Its structure is such that substances can move through it and be kept in isolation from the rest of the cell until the manufacturing processes conducted within are completed. There are...
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...bacteria and archaea Cells structure is simple Eukaryotes- every organism that has more than one cell. Cell structure is more complex than prokaryotes Prokaryotes Prokaryotic cells are one celled organisms they were the first organisms on the planet First appeared around 3.7 bya Have a free flowing nucleoid with no nuclear envelope Cytoplasm- gel like, holds all of the cells internal structures (organellas) Ribosomes- you should know. Flagella- used for locomotion as well as a sensory tool (also present in eukaryotes) Pili- help with attaching to surfaces and the transfer of dna Eukaryotic First appeared 1.5 bya Has a nucleus contained in a nuclear membrane Many more organelles Mitochondria Mitochondria Responsible for producing energy Separate dna called, mitochondria dna, which is only passed down through the mother Eukaryotes Two types of cells in complex organisms Somatic cell (body cell) Diploid-has full set of paired chromosomes (46) Gamete cell (sex cell) Haploid-only has half of the chromosomes (23) Cell division Required for an organism to, Grow, Mature, Maintain tissues, reproduce Mitosis and meiosis Mitosis Prophase Metaphase Anaphase Telophase Mitosis: prophase Dna replication has resulted in chromosome duplication Centrosomes position themselves on either side of the nucleus Nuclear membrane dissipates Mitosis: metaphase The duplicated chromosomes align in the center of the cell Centrosomes attach themselves to the chromosomes...
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...Pathophysiology NU290 Exam I Guided Review * Identify the components of the cell and their functions. * Cell Membrane: Provides isolation, protection, and support. Controls entrance/exit of materials * Cilia: Moves materials over cell surface * Microvilli: Increases SA * Centrioles: Essential for movement of chromosomes during cell division. * Ribosomes: Synthesizes proteins * ER: Communication system; metabolic function * Lysosomes: Removes damaged organelles or pathogens within cells * Mitochondria: Produces 95% of the ATP required by the cell. “power plant” transforms organic compounds into energy. Energy is stored as ATP * Nucleus: stores DNA, stores/processes genetic info; controls protein synthesis * Nucleolus: Synthesizes RNA and assembles ribosomal subunits * Golgi complex/apparatus: Works with ER to process substances into secretory granules or vesicles * Explain cell life cycle. * Interphase * Interval between cell divisions * Perform normal cellular functions * Mitosis * Prophase: Chromosomes coil and shorten, nuclear membrane dissolves. Each chromosome is made up of a pair of strands called chromatid * Metaphase: Centromeres divide, pulling chromosomes apart. Centromeres align themselves in the middle of the spindle. * Anaphase: The centromeres begin to separate and pull the newly replicated chromosomes toward...
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...differently because they are alternate forms of the monosaccharide, glucose . 6. Nucleic acids are created with phosphodiester bonds. 7. Nitrogen and carbon are common to all organic molecules. 8. Fuels such as gasoline are nonpolar and high in energy because they are largely composed of hydrocarbons. 9. Lipids serve as important energy stores and is a major component of plasma membranes. 10. The functional group -COOH has acidic properties and would release hydrogen ions in an aqueous (water) solution. 11. The peptidoglycan of the bacterial cell wall contains a carbohydrate matrix linked together by short chains of amino acids. 12. Nuclear pores apparently permit the passage of only proteins inward and outward, but RNA only outward. 13. Mitochondria and chloroplasts are the other organelles besides the nucleus that contain DNA. 14. The Golgi apparatus and ER are organelles that participate in the synthesis and modification of enzymes targeted to the plasma membrane. 15. The principles of cell theory or cell doctrine include the following: All living organisms are composed of one or more cells, cells are the smallest unit of living organisms, and new cells form from pre-existing cells by cell division. 16. The most accurate...
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...(3 marks) [Source: Final Examination for Sept 2012] Q2. Figure 2 shows two different images of cilia taken from different types of electron microscope. Figure 2 By using a table, state TWO similarities and TWO differences between the two electron microscopes. (6 marks) | P (TEM) | Q (SEM) | Similarities | | | | Differences | | | | | | [Source: Final Examination for April 2014] Q3. Figure 3 shows the method used to isolate cell components. Figure 3 (a) Name the procedure shown in Figure 3. (1 mark) (b) Briefly explain why the isolation of components of cells is possible using this procedure. (1 mark) (c) State ONE important procedure that needs to be done before centrifugation in...
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...“The longer you live the longer you should live” –Wiley “Evolution’s a bitch” –Wiley “Suckers are good to eat” –Wiley WHAT HAS EVOLUTION DONE FOR ME What has evolution done for me • Agricultural crops and animal breeding for the past 8,000 years • With the discovery of methods to reconstruct evolutionary relationships there is been a vast increase in the relevance of evolutionary biology to human society. Reconstructing Phylogenies • 1859-1950- No coherent empirical methods • 1950-1966- Emergence of Phylogenetic Systematics • Phylogeny by discovery of the order of evolutionary innovation Ribotyping • Fingerprinting or sequencing RNA • Many diseases have unknown causes • However, diseased tissues can be ribotyped. (Wiley Death Fish) • This process involves extracting DNA from diseased tissues and then sequencing the DNA that codes for rRNA. • If a disease agent such as a bacteria is present, then we will get ribosomal DNA sequences from the host (you) and the bacteria (the infection agent). Ribotyping: Phylogeny matching • Once we have the rDNA sequences, we can plug them into a sequence matrix of all life and see where our unknowns appear on the tree of life. Our Food Chain • Some products are easy to identify, but others are not. • A slab of fish fillet from a sea bass looks like a slab of sih fillet from a farmed Asian catfish. • But the sea bass costs $10/pound while the Asian catfish...
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...The Evolution of Modern Humans Two origins are considered when thinking about the evolution of modern humans. There’s the “Multiregional Model” that concentrates on a multiple origins theory in which the different human populations or races had independent origins and evolved in isolation from each other, and there’s the recent single-orgin hypothesis or the “Out of Africa” which holds that anatomically modern humans evolved in Africa between 200,000 and 100,000 years ago. With this theory humans started to leave Africa after evolving. Both theories support that human evolution began in africa, but the “Out of Africa” theory has gotten much more support over the last decade, but there are still many people who support the the multiregional hypothesis. Until the recent years the only way to the only way of learning about ancient ancestors was through old fossils and stone tools. The “Multiregional Model” is the older model that consists of several models of human evolution which all posit that the human races evolved from separate archaic humans over millions of years. The “Multiregional Model” posits that 1.5 million years ago marked the beginning human evolution and that fossil samples represent the the evolving of homo sapiens. According to the theory there is no one place where homo sapiens evolved. They may have developed in Africa and then spreaded, or maybe they started in Europe and Asia and spreaded from there. Support for Multiregional The fossil record...
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...offshore and manages to survive and reproduce there for a period of 10,000 years. After that period, a climate change results in lower sea levels and the reconnection of the island with the mainland. Members of the formerly isolated island finch population can now interact freely with members of the original mainland population. Which of the following observations would, by itself, lead you to conclude unequivocally that the island finch population had evolved into a distinct species, according to the biological species concept? A) Individuals from the different populations sometimes mate with each other, but all of the resulting eggs are sterile. Which of the following conditions is necessary for speciation to occur? D) Reproductive isolation At which point in the adaptation of a population is it clear that speciation has occurred? B) Gene pool changes establish reproductive barriers between two populations. Prezygotic barriers _____. B) Prevent fertilization of gametes from members of closely related species Three species of frogs, Rana pipiens, Rana clamitans, and Rana sylvatica, all mate in the same ponds, but they pair off correctly because they have different calls. This is a specific example of a _____ barrier, called _____. A) Prezygotic ......
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...Water Hydrolysis: Addition of H2O to break it apart. Dehydration: Removal of H2O to form a bond. Carbohydrates Monosaccharide: 2 common types Glucose (Hexopyranose RLRR), fructose Disaccharide: 3 common types glucose + fructose alpha glucocsidic bond = sucrose (table sugar) glucose + galactose beta galactosidic bond = lactose glucose + glucose = maltose Polysaccharide: 4 common types Starch: alpha 1,4 & 1,6 bonds btwn glucoses. amylose and amylopectin Glycogen: different branching than starch. Found in animals Cellulose: beta glucose polymer. Plant cell walls Chitin: similar to cellulose with extra nitrogen containing group. Fungus cell wall and exoskeleton Lipids Triglyceride 3 fatty acids attached to glycerol. Phospholipid One fatty acid in triglyceride replaced with a R containing phosphate group Steroids 4 carbon rings. 3 cyclohexane and 1 cyclopentane Proteins Primary structure AA sequence Secondary 3D shape resulting from hydrogen bonding btwn amino and carboxyl group. Alpha helix and beta pleated sheets Tertiary Hydrogen bonding btwn R groups Ionic bonding btwn R groups Hydrophobic and hydrophilic effects Disulfide bonds btwn Cysteine Quaternary Multiple tertiary structures come together. H-bond, disulfide bond, hydrophilic/phobic interactions Nucleic acids Polymer of what? nucleotides Parts of DNA Nitrogen base, 5 carbon sugar, phosphate group Structure 1' attached to base, 5' attached to phosphate group, 3' attached to another nucleotide, antiparallel Base types & number...
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...The Technology of Medicine A. Indispensable 1. Absolutely necessary or essential. 2. "It is indispensable. B. intractable 1. not easily governed, managed, or directed 2. It is what physicians must now do for patients with intractable cancer, severe rheumatoid arthritis, multiple sclerosis, stroke, and advanced cirrhosis. C. sclerosis 3. an induration or hardening, especially from inflammation and in diseases of the interstitial substance; 4. It is what physicians must now do for patients with intractable cancer, severe rheumatoid arthritis, multiple sclerosis, stroke, and advanced cirrhosis. D. glomerulonephritis 5. a renal disease (usually of both kidneys) 6. In chronic glomerulonephritis, for example, a much clearer insight will be needed into the events leading to the destruction of glomeruli by the immunologic reactants that now appear to govern this disease, before one will know how to intervene intelligently to prevent the process, or turn it around. E. immunologic 7. A branch of biomedical science that covers the study of all aspects of the immune system in all organisms. 8. In chronic glomerulonephritis, for example, a much clearer insight will be needed into the events leading to the destruction of glomeruli by the immunologic reactants that now appear to govern this disease, before one will know how to intervene intelligently to prevent the process, or turn it around...
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...chemicals are used as probes for detecting specific genes that may be present in complex mixtures of DNA. Cloned genes also make it easier to study the proteins they encode. Because the genetic code of bacteria is identical to that of eukaryotes, a cloned animal or plant gene that has been introduced into a bacterium can often direct the bacterium to produce its protein product, which can then be purified and used for biochemical experimentation. Cloned genes can also be used for DNA sequencing, which is the determination of the precise order of all the base pairs in the gene. All of these applications require many copies of the DNA molecule that is being studied. Gene cloning also enables scientists to manipulate and study genes in isolation from the organism they came from. This allows researchers to conduct many experiments that would be impossible without cloned genes. For research on humans, this is clearly a major advantage, as direct experimentation on humans has many technical, financial, and ethical limitations. Importance for Medicine and Industry The ability to clone a gene is not only valuable for conducting biological research. Many important pharmaceutical drugs and industrial enzymes are produced from cloned genes. For example, insulin, clotting factors, human growth hormone, cytokines (cell growth stimulants), and several anticancer drugs in use are produced from cloned genes. Before the advent of gene cloning, these proteins had to be purified from their...
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...Unit 2 summary notes AQA GCSE Biology Summary Notes For Unit B2 Exam Tuesday th May 13 2014 Page 1 AQA GCSE Biology – Unit 2 summary notes B2.1 Cells and Cell Structures Summary All living things are made up of cells. The structures of different types of cells are related to their functions. To get into or out of cells, dissolved substances have to cross the cell membranes. Cells Cells are the smallest unit of life. All living things are made of cells. Most human cells, like most other animal cells, have the following parts: o nucleus o cytoplasm o cell membrane o mitochondria o ribosomes Plant and algal cells also have: o cell wall o chloroplasts o permanent vacuole What do these structures do? Nucleus – controls the activities of the cell. Cytoplasm – where most of the chemical reactions take place. Cell membrane - controls the passage of substances in and out of the cell. Mitochondria - where most energy is released in respiration. Page 2 AQA GCSE Biology – Unit 2 summary notes Ribosomes - where protein synthesis occurs. Cell wall – made of cellulose and strengthens plant cells. Chloroplasts - absorb light energy to make food in plant cells. Permanent vacuole - filled with cell sap in plant cells. Yeast Yeast is a single-celled organism. The cells have a nucleus, cytoplasm and a membrane surrounded by a cell wall. Bacteria Bacterium is a single-celled organism. A bacterial cell consists of cytoplasm and a membrane surrounded by a cell...
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...What is Microbiology? Microbiology is the study of organisms too small to be seen with the naked eye. Originally, emphasis was placed on harmful micro organisms which cause disease or spoilage of beverages and food, but it is now recognized that many microbes have essential roles in our ecosystem or can be used to accomplish beneficial tasks. Human history is full of examples of major devastations caused by bacteria and viruses. Some of these historically important diseases still occur, such tuberculosis and yellow fever. Microorganisms are evolving to cause new infectious disease problems such as Lyme disease and AIDS, which capture public attention. Control and eradication of infectious diseases remain important goals of many microbiologists. The recognition that microorganisms were responsible for what was earlier thought to be "spontaneous generation" opened the door to industrial (pharmaceutical, chemical, energy) and food microbiology, technologies which contribute substantially to today's way of life. Microorganisms in soil and water are essential in the transformation of carbon, nitrogen, oxygen, sulfur and iron to products needed by plants and animals. In various ways, microbes participate in environmental cycling and degradation and global change. In the last few decades, microorganisms have been recognized as ideal model systems for the study of basic biological processes. More recently, microbiologists have brought an exciting dimension to the study of biology...
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