...Bacteria can be altered to produce certain enzymes that metabolize industrial waste components that are toxic to other life, and also new pathways can be designed for the biodegradation of various wastes. Since waste management itself is a well-established industry, genetics and enzymology can be simply "bolted-on" to existing engineering expertise. Examination of effluents from the chemical and petrochemical industries shows that such effluents typically contain either one or a limited range of major toxic components. In some cases other considerations (such as aesthetic ones) can be important for removal of certain components (such as dyes). This means that in general one industry may apply one or a few genetically modified bacterial strains to get rid of its major toxic waste. However, it may be important to contain the "waste-eating" bacteria within the manufacturing plant, and not release these with the waste water. In such cases, filter installations will have to be built to separate the bacteria from the effluent. The release of dyes into the environment constitutes only a small proportion of water pollution, but dyes are visible in small quantities due to their brilliance. Due to this problem, mankind nowadays has concern about the potential adverse effects to the chemical industry on the environment, although the response in some parts of the world has been much faster and more intense than...
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...temperature below the optimum deactivates enzymes reactions while too high temperatures above optimum denature enzymes. S. cerevisiae, s. epidermis and l. acidophilus are facultative anaerobe (Gillespie, Hawkey, & Wiley, 2006). C. Discuss under what conditions you would want to control the growth of microbes. To grow bacteria in a laboratory the conditions in the lab needs to mimic the particular microbes natural environmental. To culture microbe’s sterile, disinfecting, aseptic techniques need to be used. For instance, aseptic techniques are also needed to transfer food to the microbe. Sterilization is a process of destroying all forms of life on an object or in a material including endospores. Disinfectant are chemicals which kill growing microbes, but not necessarily spore and are used on inanimate objects. Antiseptic are chemical agent that prevents the growth microbes Sanitizers are chemical agents that reduce microbial populations to safe levels. To create a conducive environment for microbe’s temperature needs to be considered, most bacteria will grow between 30-40 degrees F there are some that will grow in 0 degrees F. An acidic or alkaline environment may be needed...
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...were responsible for what was earlier thought to be "spontaneous generation" opened the door to industrial (pharmaceutical, chemical, energy) and food microbiology, technologies which contribute substantially to today's way of life. Microorganisms in soil and water are essential in the transformation of carbon, nitrogen, oxygen, sulfur and iron to products needed by plants and animals. In various ways, microbes participate in environmental cycling and degradation and global change. In the last few decades, microorganisms have been recognized as ideal model systems for the study of basic biological processes. More recently, microbiologists have brought an exciting dimension to the study of biology through the use of genetic engineering techniques and highly specific protein (antibody) molecules. Accomplishments in these areas already have led to enormous benefits for the human race, but there are many more challenges to be conquered through these kinds of studies. In the future, studies in space microbiology may help to reveal if there is life on other planets and the role of...
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...exceptionally high in potassium. A nutritious sprouted mung bean offers the same amount of vitamin A as a lemon, the niacin of a banana, the thiamine of an avocado, the riboflavin of a dried apple, the carbohydrate content of a melon and the ascorbic acid of a loganberry (http://www.specialtyproduce.com). The sprouting process encourages the rapid growth of microorganisms that reach very high numbers in the finished product (Fu et al., 2000). Seed sprouting provides an excellent environment for the growth of many types of organisms. The release of nutrients from the sprouting seeds, the moisture resulting from the irrigation process, the aerobic conditions, pH and temperatures favorable to mesophiles all contribute to the rapid expansion of microbial population, including food pathogens, during sprouting. Population as high as 109 CFU/g have been reported in sprouts obtained from retail stores (Patterson et al, 1980, Prokopowich et al, 1991). Many published studies have shown that pathogenic bacteria not only survive but can also grow on sprouts under favorable conditions (Portnoy et al., 1976, Harris et al., 1986, Steinbruegge et al., 1988, Abdoul-Raouf et al., 1993, and Farber et al., 1998). The seeds are generally...
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...Purpose To examine the microbial population of an elliptical at the Dixon Recreation Center by analysis of DNA from an uncultured community sample. 16S rRNA genes will distinguish bacteria and represent the microbial diversity of the sampled elliptical. An estimate of the cleanliness of the elliptical will be made based on species-abundance as well as evidence of any pathogenic strains. We will also compare and contrast respective populations of bacteria on clean and disinfected ellipticals to assess disinfectant effectiveness. Methods We collected bacteria from the elliptical, purified and amplified the total community DNA, and then analyzed the sequenced DNA with Mi Seq Software. A revised protocol was used to extract, purify, and sequence the community DNA; these methods were followed without deviation (1). The procedure to sequence and configure the data is described on Blackboard (2). Results PCR amplification of the community DNA product was unsuccessful. There was no evidence of PCR amplified DNA on the gel (Figure 1.1). An alternate gel from Molecular Microbiology Laboratory was used as a model to perform gel electrophoresis of the community DNA (2). A plot of migration distance vs. size that includes the Invitrogen ladder can be used to determine the size of the PCR amplified community DNA (Figure 1.2). [Figure 1.2] Base Pairs vs. Migration Distance of Invitrogen Low DNA Mass Ladder. The distance these...
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...Aacknowledgement First of all I like to thank God almighty who authorise me to research on this topic. I submit my sincere thanks to my supervisor Medhat Khattar for his valuable presence, time, effort, guidance and help to complete this dissertation. My dissertation would not have been completed without the help of lab technicians Nick and Suzy, I am extremely grateful for their help, suggestions and encouragement. I might want to thank my family for impacting in me a comprehension for the significance of education and an appreciation for diligent work. I extraordinarily value the majority of the penances that were made so as to realize the open doors that I have gotten, and it is my trusts that this proposition embodies what I have realized. Much obliged to you for your dedication, bolster, and affection. I might likewise want to thank my grandparents for the numerous hours of math mentoring as a youngster. In spite of the fact that it may have appeared to be inconsequential, it was the premise for my prosperity and the establishment of my hobbies in Designing. I might want to devote this proposition to my family, without whom I would not be seeking after a profession with an instruction from my university undergraduate days. I also thank my supervisor’s effort and good work channelled towards making me a better microbiologist in the world. I sincerely extend my thanks all concerned people who together with me in this regard. Table of Contents I Declaration......
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...Bioremediation Methods for Oil Spills Contents I. Introduction II. History of Bioremediation 1. ‘Courtship’ Period (Pre-1989) 2. ‘Honeymoon’ Period (1989-1991) 3. ‘Establishment’ Period (since 1992) III. The Biological and Chemical Processes of Bioremediation 1. Biodegradation a. Biological Process b. Degrading Species c. Chemical Process d. Need for Bioremediation 2. Bioremediation a. Seeding with Microbial Cultures b. Environmental Modification IV. Recent Applications of Bioremediation Techniques and their Effectiveness 1. Amoco Cadiz 2. Exxon Valdez 3. Mega Borg 4. Apex Barges 5. Arabian Gulf War V. Conclusion Bibliography Bioremediation Methods for Oil Spills Abstract. The increasing number of marine oil spills asks for effective solutions for the environment. Bioremediation techniques have become a major mechanism for removing oil residues on the affected shorelines. Among the different techniques to enhance natural biodegradation by indigenous microorganisms, seeding of new bacteria and fertilizing the indigenous populations have attracted the most interest. The application of nutrients as nitrogen and phosphorus in the form of fertilizers have shown to be most effective in accelerating the biodegradation process and at the same time to be environmentally safe. I. Introduction Since the freighter Pallas caused the worst oil pollution of the tidel shallows in the North Sea...
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...Bioremediation Contents I. Introduction II. History of Bioremediation 1. ‘Courtship’ Period (Pre-1989) 2. ‘Honeymoon’ Period (1989-1991) 3. ‘Establishment’ Period (since 1992) III. The Biological and Chemical Processes of Bioremediation 1. Biodegradation a. Biological Process b. Degrading Species c. Chemical Process d. Need for Bioremediation 2. Bioremediation a. Seeding with Microbial Cultures b. Environmental Modification IV. Recent Applications of Bioremediation Techniques and their Effectiveness 1. Amoco Cadiz 2. Exxon Valdez 3. Mega Borg 4. Apex Barges 5. Arabian Gulf War V. Conclusion Bibliography Bioremediation Methods for Oil Spills Abstract. The increasing number of marine oil spills asks for effective solutions for the environment. Bioremediation techniques have become a major mechanism for removing oil residues on the affected shorelines. Among the different techniques to enhance natural biodegradation by indigenous microorganisms, seeding of new bacteria and fertilizing the indigenous populations have attracted the most interest. The application of nutrients as nitrogen and phosphorus in the form of fertilizers have shown to be most effective in accelerating the biodegradation process and at the same time to be environmentally safe. I. Introduction Since the freighter Pallas caused the worst oil pollution of the tidel shallows in the North Sea last November, thousands of sea birds and probably...
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...sustainability and public concern about the use of hazardous pesticides. There is now unequivocal evidence that antibiotics play a key role in the suppression of various soilborne plant pathogens by antagonistic microorganisms. The significance of antibiotics in biocontrol, and more generally in microbial interactions, often has been questioned because of the indirect nature of the supporting evidence and the perceived constraints to an-tibiotic production in rhizosphere environments. Reporter gene systems and bio-analytical techniques have clearly demonstrated that antibiotics are produced in the spermosphere and rhizosphere of a variety of host plants. Several abiotic factors such as oxygen, temperature, specific carbon and nitrogen sources, and microelements have been identified to influence antibiotic production by bacteria biocontrol agents. Among the biotic factors that may play a determinative role in antibiotic production are the plant host, the pathogen, the indigenous microflora, and the cell density of the producing strain. This review presents recent advances in our understanding of antibiotic production by bacterial biocontrol agents and their role in microbial interactions. Introduction For many decades, bacteria have been introduced into soil or on seeds, roots, bulbs or other planting ma-terial to improve plant growth and...
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...Deepika et al. Microbial Cell Factories 2012, 11:116 http://www.microbialcellfactories.com/content/11/1/116 RESEARCH Open Access Influence of fermentation conditions on the surface properties and adhesion of Lactobacillus rhamnosus GG Gurjot Deepika1, Esther Karunakaran2, Claire R Hurley3, Catherine A Biggs2 and Dimitris Charalampopoulos1* Abstract Background: The surface properties of probiotic bacteria influence to a large extent their interactions within the gut ecosystem. There is limited amount of information on the effect of the production process on the surface properties of probiotic lactobacilli in relation to the mechanisms of their adhesion to the gastrointestinal mucosa. The aim of this work was to investigate the effect of the fermentation pH and temperature on the surface properties and adhesion ability to Caco-2 cells of the probiotic strain Lactobacillus rhamnosus GG. Results: The cells were grown at pH 5, 5.5, 6 (temperature 37°C) and at pH 6.5 (temperature 25°C, 30°C and 37°C), and their surfaces analysed by X-ray photoelectron spectrometry (XPS), Fourier transform infrared spectroscopy (FT-IR) and gel-based proteomics. The results indicated that for all the fermentation conditions, with the exception of pH 5, a higher nitrogen to carbon ratio and a lower phosphate content was observed at the surface of the bacteria, which resulted in a lower surface hydrophobicity and reduced adhesion levels to Caco-2 cells as compared to the control fermentation (pH 6.5...
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...This chapter focuses on the method of controlling juvenile mosquitoes while in life stages (larvae & pupae) which only occur in water. To safely alter our aquatic environments, even temporarily, for the purpose of controlling mosquitoes, requires a good working knowledge of both the target species and larvicides, which include commercial pesticides and natural predators. Products and techniques currently used in Florida are discussed in detail, and the benefits and risks of each are considered. Commercial pesticide information includes summaries and information provided by manufacturers. Minor differences between various formulations of the same or similar active ingredients are detailed so that the competency of each product may be compared. The old days of smothering everything with one pesticide such as waste oil are gone, and mosquito control is rapidly approaching an age of prescription applications where a competent operator will apply one or a combination of larvicides in an environmentally friendly manner under a given set of conditions. Commercial pesticide sections summarize data found in manufacturers’ current product literature and labels. Two of many additional sources of information on mosquito larvicides are: • U.S. Environmental Protection Agency HTTP://WWW.EPA.GOV/PESTICIDES/HEALTH/MOSQUITOES/LARVICIDES4MOSQUITOES.HTM • Alameda County, California Mosquito Control HTTP://WWW.MOSQUITOES.ORG/BIORAT.HTML The University of Florida published a handbook (Dean...
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...concern about plastics. With the excessive use of plastics and increasing pressure being placed on capacities available for plastic waste disposal, the need for biodegradable plastics and biodegradation of plastic wastes has assumed increasing importance in the last few years. Awareness of the waste problem and its impact on the environment has awakened new interest in the area of degradable polymers. The interest in environmental issues is growing and there are increasing demands to develop material which do not burden the environment significantly. Biodegradation is necessary for water-soluble or water-immiscible polymers because they eventually enter streams which can neither be recycled nor incinerated. It is important to consider the microbial degradation of natural and synthetic polymers in order to understand what is necessary for biodegradation and the mechanisms involved. This requires understanding of the interactions between materials and microorganisms and the biochemical changes involved. Widespread studies on the biodegradation of plastics have been carried out in order to overcome the environmental problems associated with synthetic plastic waste. This paper reviews the current research on the biodegradation of biodegradable and also the conventional...
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...purified (i.e., second generation vaccines) (Bagnoli et al., 2011). Omics is increasingly being applied to vaccinology, resulting in the development of third generation vaccines (Bagnoli et al., 2011). There are three chief omics’ approaches to vaccine discovery: “genomics-based antigen selection” (GBAS), “proteomic-based antigen” selection (PBAS), and “immunomics-based antigen selection” (IBAS) approaches (Bagnoli et al., 2011, pp. 545-554). GBAS uses comparative genomics (the comparison of various genomes to ascertain antigen conservation) and pan-genomics (the study of basically every gene present in every strain of a species) (Bagnoli et al., 2011). This results in an increased understanding of “intraspecies and interspecies antigen variability and distribution” (Bagnoli et al., 2011, p. 549). Antigens that found in both pathogenic and nonpathogenic commensal strains are unlikely to be responsible for virulence; such...
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...used to help clean up oil spills. Bioremediation of a contaminated site typically works in one of two ways. In the case described above, ways are found to enhance the growth of whatever pollution-eating microbes might already be living at the contaminated site. In the second, specialized microbes are added to degrade the contaminants. Bioremediation provides a good cleanup strategy for some types of pollution, but as you might expect, it will not work for all. For example, bioremediation may not provide a feasible strategy at sites with high concentrations of chemicals that are toxic to most microorganisms. These chemicals include metals such as cadmium or lead, and salts such as sodium chloride. Nonetheless, bioremediation provides a technique for cleaning up pollution by enhancing the same biodegradation processes that occur in nature. Depending on the site and its contaminants, bioremediation may be safer and less expensive than alternative solutions such as...
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...plays a important role in the biochemical agent for the conversion of complex organic compounds into simple organic compounds (Glazer and Nikaido, 1995). Microorganisms are closely associated with health and welfare of human beings. Some Microorganisms are beneficial and others are detrimental. For example, Microorganisms are involved in the making of yoghurt, cheese and wine, in the production of Penicillin, interferons and alcohol, and the processing of industrial and domestic wastes. Microorganisms can cause disease, spoil food and deteriorate materials like iron, pipes, glass lenses and wood pilings (Glazer and Nikaido, 1995). Most of these Microorganisms irrespective of their origins, were subsequently modified by conventional strain improvement strategies, using mutagenesis or breeding programmes to improve their properties for industrial use (Trevor Palmor, 2004). In most cases regulatory considerations are of major importance when choosing microorganisms for industrial use. Fermentation industries often prefer to use established GRAS(Generally Regarded As Safe) microorganisms, particularly for the...
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